CyVerse Learning Institute Foundational Open Science Skills 2020

foss-2020-spring

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Before you Arrive

Before you arrive
Pre-Workshop Setup

Getting Started

Open Science Introductory Activity

Essential Skills

Command Line and the Unix Shell
Basics of Linux

Reproducible Science

Introduction to Reproducible Science
Communication
GitHub
CI/CD
Websites & Documentation

Data Management

Data Management Overview
FAIR Data
Data Management Plans (DMP)
Data Management Tools

Using CyVerse

About CyVerse
Accessing Data Store
Discovery Environment - Data Management
Discovery Environment - Data Analysis
Discovery Environment - Tools & Apps
Discovery Environment - VICE

Cyberinfrastructure

Introduction to Cloud Computing
Atmosphere
Research Cyberinfrastructure associated with CyVerse
Other Cyberinfrastructure Projects

Containers

Introduction to containers
Launching a Docker app on Atmosphere
Introduction to Docker
Advanced Docker

Using RStudio

Introduction to R & RStudio
RStudio with Version Control

GitHub Action and EHT

GitHub Action and EHT Demo

CyVerse Learning Institute Foundational Open Science Skills 2020

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